| Round | Overall | Player |
|---|---|---|
| 1 | 7th |
QB
Mark Brunell
|
| 2 | 18th |
RB
Marshall Faulk
|
| 3 | 31st |
WR
Jimmy Smith
|
| 4 | 42nd |
RB
Terry Allen
|
| 5 | 55th |
WR
Tony Martin
|
| 6 | 66th |
S
Rodney Harrison
|
| 7 | 79th |
LB
Chad Brown
|
| 8 | 90th |
CB
Todd Lyght
|
| 9 | 103rd |
TE
Tony Gonzalez
|
| 10 | 114th |
DL
Bryant Young
|
| 11 | 127th |
QB
Rob Johnson
|
| 12 | 138th |
LB
Roman Phifer
|
| 13 | 151st |
DL
Simeon Rice
|
| 14 | 162nd |
RB
Bam Morris
|
| 15 | 175th |
WR
Will Blackwell
|
| 16 | 186th | LB Dwayne Gordon |
| 17 | 199th |
DL
Ted Washington
|
| 18 | 210th |
QB
Jim Harbaugh
|
| 19 | 223rd |
RB
Ki-Jana Carter
|
| 20 | 234th |
TE
Damon Jones
|
| 21 | 247th |
WR
Reidel Anthony
|
| 22 | 258th |
S
Lawyer Milloy
|
| 23 | 271st |
WR
Ed McCaffrey
|
| 24 | 282nd |
DL
Hugh Douglas
|
| 25 | 295th |
PK
Cary Blanchard
|
| 26 | 306th |
CB
Cris Dishman
|
| 27 | 319th |
PK
Morten Andersen
|