| Round | Overall | Player |
|---|---|---|
| 1 | 9th | OF Larry Walker Col |
| 2 | 16th | 2B Roberto Alomar Bal |
| 3 | 33rd | OF Reggie Sanders Cin |
| 4 | 40th | 1B Andres Galarraga Col |
| 5 | 57th | 3B Travis Fryman Det |
| 6 | 64th | C Mike Stanley NYA |
| 7 | 81st | 2B Kurt Abbott Ana |
| 8 | 88th | OF Kirby Puckett Min |
| 9 | 105th | P John Smoltz Atl |
| 10 | 112th | P Rod Beck SF |
| 11 | 129th | 1B John Jaha Mil |
| 12 | 136th | OF Chad Curtis NYA |
| 13 | 153rd | OF Ruben Sierra Tor |
| 14 | 160th | P Doug Drabek ChA |
| 15 | 177th | P Pat Rapp SF |
| 16 | 184th | 3B Mike Blowers Sea |
| 17 | 201st | P Denny Neagle AtL |
| 18 | 208th | DH Mickey Tettleton Tex |
| 19 | 225th | C Jason Kendall Pit |
| 20 | 232nd | P Sid Fernandez Hou |
| 21 | 249th | P Chris Hammond Bos |
| 22 | 256th | P Jason Bere ChA |
| 23 | 273rd | P Steve Trachsel ChN |
| 24 | 280th | OF Orlando Merced Tor |
| 25 | 297th | P Bill Swift Col |
| 26 | 304th | OF Danny Tartabull ChA |