| Round | Overall | Player |
|---|---|---|
| 1 | 7th | C Mike Piazza NYN |
| 2 | 18th | 1B Mark McGwire StL |
| 3 | 31st | SP Tim Hudson Oak |
| 4 | 42nd | OF Brian S. Giles Pit |
| 5 | 55th | RP Derek Lowe Bos |
| 6 | 66th | 3B Fernando Tatis Mon |
| 7 | 79th | SP Livan Hernandez SF |
| 8 | 90th | SS Nomar Garciaparra Bos |
| 9 | 103rd | SP Barry Zito Oak |
| 10 | 114th | OF David Justice NYA |
| 11 | 127th | SP Jeff D'Amico Mil |
| 12 | 138th | 1B Ryan Klesko SD |
| 13 | 151st | RP Bob Wickman Cle |
| 14 | 162nd | OF Ichiro Suzuki Sea |
| 15 | 175th | 2B Quilvio Veras Atl |
| 16 | 186th | SS Julio Lugo Hou |
| 17 | 199th | OF Mark Quinn KC |
| 18 | 210th | 1B Chris Richard Bal |
| 19 | 223rd | SP Robert Person Phi |
| 20 | 234th | 3B Corey Koskie Min |
| 21 | 247th | SP Jamie Moyer Sea |
| 22 | 258th | SP Mike Sirotka Tor |
| 23 | 271st | SP Kirk Rueter SF |
| 24 | 282nd | RP Jose Mesa Phi |
| 25 | 295th | C Mike Matheny StL |
| 26 | 306th | 2B Ron Belliard Mil |
| 27 | 319th | SS Rey Sanchez KC |
| 28 | 330th | OF Brady Anderson Bal |
| 29 | 343rd | OF Reggie Sanders Ari |