| Round | Overall | Player |
|---|---|---|
| 1 | 7th | 1B Rafael Palmeiro Bal |
| 2 | 18th | OF Raul Mondesi LA |
| 3 | 31st | P Ramon Martinez LA |
| 4 | 42nd | OF Jay Buhner Sea |
| 5 | 55th | OF Paul O'Neill NYA |
| 6 | 66th | OF Ryan Klesko Atl |
| 7 | 79th | 2B Jeff Kent SF |
| 8 | 90th | 3B Todd Zeile LA |
| 9 | 103rd | P Andy Benes StL |
| 10 | 114th | P John Franco NYN |
| 11 | 127th | SS Gary DiSarcina Ana |
| 12 | 138th | P Jim Abbott Ana |
| 13 | 151st | P Wilson Alvarez ChA |
| 14 | 162nd | P Kevin Brown Fla |
| 15 | 175th | P Ben McDonald Mil |
| 16 | 186th | P John Burkett Tex |
| 17 | 199th | C Joe Oliver Cin |
| 18 | 210th | SS Greg Gagne LA |
| 19 | 223rd | 1B David Segui Mon |
| 20 | 234th | P William VanLandingham SF |
| 21 | 247th | 3B Wade Boggs NYA |
| 22 | 258th | OF Henry Rodriguez Mon |
| 23 | 271st | 2B Joey Cora Sea |
| 24 | 282nd | P Greg Swindell Min |
| 25 | 295th | C Rick Wilkins Sea |
| 26 | 306th | OF Eric Anthony LA |