| Round | Overall | Player |
|---|---|---|
| 1 | 4th | 1B Jason Giambi NYA |
| 2 | 21st | OF Shawn Green LA |
| 3 | 28th | SP Tim Hudson Oak |
| 4 | 45th | OF Ken Griffey Jr Cin |
| 5 | 52nd | SP Roger Clemens NYA |
| 6 | 69th | 2B Alfonso Soriano NYA |
| 7 | 76th | RP Armando Benitez NYN |
| 8 | 93rd | SS Cristian Guzman Min |
| 9 | 100th | SP Josh Beckett Fla |
| 10 | 117th | SP Andy Pettitte NYA |
| 11 | 124th | C Charles Johnson Fla |
| 12 | 141st | SP Kelvim Escobar Tor |
| 13 | 148th | 3B Sean Burroughs SD |
| 14 | 165th | SP Tony Armas Jr. Mon |
| 15 | 172nd | OF Carlos Lee ChA |
| 16 | 189th | OF Roger Cedeno NYN |
| 17 | 196th | SP Dustin Hermanson Bos |
| 18 | 213th | SP Mark Prior ChN |
| 19 | 220th | 2B Luis Rivas Min |
| 20 | 237th | DH Brad Fullmer Ana |
| 21 | 244th | SP Octavio Dotel Hou |
| 22 | 261st | OF Kenny Lofton ChA |
| 23 | 268th | OF Robert Fick Det |
| 24 | 285th | SP Rick Ankiel StL |
| 25 | 292nd | C Ben Davis Sea |
| 26 | 309th | 3B Joe Randa KC |
| 27 | 316th | RP Felix Rodriguez SF |
| 28 | 333rd | 3B Mark Teixeira Tex |
| 29 | 340th | SP Denny Neagle Col |