| Round | Overall | Player |
|---|---|---|
| 1 | 11th | 3B Troy Glaus Ana |
| 2 | 14th | OF Chipper Jones Atl |
| 3 | 35th | RP Mariano Rivera NYA |
| 4 | 38th | OF Brian S. Giles Pit |
| 5 | 59th | RP Keith Foulke ChA |
| 6 | 62nd | SS Rich Aurilia SF |
| 7 | 83rd | OF Ryan Klesko SD |
| 8 | 86th | SP Jon Lieber ChN |
| 9 | 107th | SP Tom Glavine Atl |
| 10 | 110th | SP Bartolo Colon Cle |
| 11 | 131st | SP Jeff Weaver Det |
| 12 | 134th | OF Jose Cruz Jr Tor |
| 13 | 155th | OF Trot Nixon Bos |
| 14 | 158th | RP Danny Graves Cin |
| 15 | 179th | 1B John Olerud Sea |
| 16 | 182nd | 3B Jeff Cirillo Sea |
| 17 | 203rd | 2B Marcus Giles Atl |
| 18 | 206th | 1B Fred McGriff ChN |
| 19 | 227th | SP Livan Hernandez SF |
| 20 | 230th | OF Frank Catalanotto Tex |
| 21 | 251st | SP Steve Sparks Det |
| 22 | 254th | RP Mike Williams Pit |
| 23 | 275th | OF Kevin Millar Fla |
| 24 | 278th | SP Steve Trachsel NYN |
| 25 | 299th | C Brad Ausmus Hou |
| 26 | 302nd | 2B D'Angelo Jimenez SD |
| 27 | 323rd | SP Albie Lopez Atl |
| 28 | 326th | SS Royce Clayton ChA |
| 29 | 347th | C Mike Rivera Det |