| Round | Overall | Player |
|---|---|---|
| 1 | 6th | SP Randy Johnson Ari |
| 2 | 19th | 1B Jeff Bagwell Hou |
| 3 | 30th | RP Mariano Rivera NYA |
| 4 | 43rd | OF Magglio Ordonez ChA |
| 5 | 54th | 2B Alfonso Soriano NYA |
| 6 | 67th | SP Bartolo Colon Cle |
| 7 | 78th | RP Billy Wagner Hou |
| 8 | 91st | 1B Paul Konerko ChA |
| 9 | 102nd | C Toby Hall TB |
| 10 | 115th | 1B Mo Vaughn NYN |
| 11 | 126th | 3B Jeff Cirillo Sea |
| 12 | 139th | DH Edgar Martinez Sea |
| 13 | 150th | SP Jarrod Washburn Ana |
| 14 | 163rd | SS Edgar Renteria StL |
| 15 | 174th | OF Garret Anderson Ana |
| 16 | 187th | 3B Mike Lowell Fla |
| 17 | 198th | SP Joel Pineiro Sea |
| 18 | 211th | 3B Morgan Ensberg Hou |
| 19 | 222nd | OF Roger Cedeno NYN |
| 20 | 235th | SP Orlando Hernandez NYA |
| 21 | 246th | SS Carlos Guillen Sea |
| 22 | 259th | SP Steve Sparks Det |
| 23 | 270th | 2B Damion Easley Det |
| 24 | 283rd | C Ben Molina Ana |
| 25 | 294th | OF Jacque Jones Min |
| 26 | 307th | SP Andy Ashby LA |
| 27 | 318th | RP Paul Quantrill LA |
| 28 | 331st | OF Steve Finley Ari |
| 29 | 342nd | 3B Joe Crede ChA |