| Round | Overall | Player |
|---|---|---|
| 1 | 12th | 3B Troy Glaus Ana |
| 2 | 13th | OF Lance Berkman Hou |
| 3 | 36th | OF Luis Gonzalez Ari |
| 4 | 37th | SP Matt Morris StL |
| 5 | 60th | RP Keith Foulke ChA |
| 6 | 61st | OF Gary Sheffield Atl |
| 7 | 84th | 1B Richie Sexson Mil |
| 8 | 85th | SP Darryl Kile StL |
| 9 | 108th | 2B Jose Ortiz Col |
| 10 | 109th | SS Cristian Guzman Min |
| 11 | 132nd | OF Mike Cameron Sea |
| 12 | 133rd | SP Ryan Dempster Fla |
| 13 | 156th | RP Roberto Hernandez KC |
| 14 | 157th | SP Jarrod Washburn Ana |
| 15 | 180th | C Charles Johnson Fla |
| 16 | 181st | SP Mike Hampton Col |
| 17 | 204th | SP Aaron Sele Ana |
| 18 | 205th | OF Bob Higginson Det |
| 19 | 228th | SP Steve Sparks Det |
| 20 | 229th | SP Shane Reynolds Hou |
| 21 | 252nd | 3B Todd Zeile Col |
| 22 | 253rd | C Ben Davis Sea |
| 23 | 276th | SP Scott Erickson Bal |
| 24 | 277th | 1B Kevin Young Pit |
| 25 | 300th | OF Greg Vaughn TB |
| 26 | 301st | RP Mike DeJean Mil |
| 27 | 324th | SS Carlos Guillen Sea |
| 28 | 325th | 2B Frank Menechino Oak |
| 29 | 348th | SP Kip Wells Pit |