| Round | Overall | Player |
|---|---|---|
| 1 | 6th | 2B Alfonso Soriano NYA |
| 2 | 19th | SP Pedro Martinez Bos |
| 3 | 30th | OF Pat Burrell Phi |
| 4 | 43rd | C Ivan Rodriguez Fla |
| 5 | 54th | 1B Paul Konerko ChA |
| 6 | 67th | SP Kevin Millwood Phi |
| 7 | 78th | OF Bernie Williams NYA |
| 8 | 91st | SS Rich Aurilia SF |
| 9 | 102nd | SP Jason Schmidt SF |
| 10 | 115th | OF Jacque Jones Min |
| 11 | 126th | 3B Edgardo Alfonzo SF |
| 12 | 139th | SP Hideo Nomo LA |
| 13 | 150th | OF Darin Erstad Ana |
| 14 | 163rd | RP Ugueth Urbina Fla |
| 15 | 174th | SS Jose Valentin ChA |
| 16 | 187th | RP Danys Baez Cle |
| 17 | 198th | OF Jose Cruz Jr SF |
| 18 | 211th | SP Tim Wakefield Bos |
| 19 | 222nd | SP Kenny Rogers Min |
| 20 | 235th | 1B Scott Spiezio Ana |
| 21 | 246th | 2B Eric Young SF |
| 22 | 259th | C Damian Miller ChN |
| 23 | 270th | SP Jason Marquis Atl |
| 24 | 283rd | DH Brad Fullmer Ana |
| 25 | 294th | SP Ryan Jensen SF |
| 26 | 307th | OF Mark Kotsay SD |
| 27 | 318th | SP Jason Simontacchi StL |
| 28 | 331st | 3B Vinny Castilla Atl |
| 29 | 342nd | C Ben Molina Ana |