| Round | Overall | Player |
|---|---|---|
| 1 | 9th | SS Nomar Garciaparra ChN |
| 2 | 16th | SP Curt Schilling Bos |
| 3 | 33rd | OF Vernon Wells Tor |
| 4 | 40th | OF Aubrey Huff TB |
| 5 | 57th | SS Rafael Furcal Atl |
| 6 | 64th | RP Trevor Hoffman SD |
| 7 | 81st | OF Hideki Matsui NYA |
| 8 | 88th | OF Jose Guillen Ana |
| 9 | 105th | SS Jose Reyes NYN |
| 10 | 112th | RP Francisco Cordero Tex |
| 11 | 129th | OF J.D. Drew Atl |
| 12 | 136th | SP Mark Redman Oak |
| 13 | 153rd | 3B Melvin Mora Bal |
| 14 | 160th | C Matthew LeCroy Min |
| 15 | 177th | OF Darin Erstad Ana |
| 16 | 184th | 1B Ben Broussard Cle |
| 17 | 201st | SP Jeremy Affeldt KC |
| 18 | 208th | 1B Ken Harvey KC |
| 19 | 225th | RP Danys Baez TB |
| 20 | 232nd | 3B Edgardo Alfonzo SF |
| 21 | 249th | 2B Adam Kennedy Ana |
| 22 | 256th | SP Elmer Dessens Ari |
| 23 | 273rd | SP Brian Anderson KC |
| 24 | 280th | SS Khalil Greene SD |
| 25 | 297th | C Ben Davis ChA |
| 26 | 304th | SP Jason Marquis StL |
| 27 | 321st | SP Doug Waechter TB |
| 28 | 328th | SP Jason Johnson Det |
| 29 | 345th | OF Craig A. Wilson Pit |