| Round | Overall | Player |
|---|---|---|
| 1 | 4th | 1B Todd Helton Col |
| 2 | 21st | OF Gary Sheffield NYA |
| 3 | 28th | 3B Scott Rolen StL |
| 4 | 45th | SP Kerry Wood ChN |
| 5 | 52nd | SP Josh Beckett Fla |
| 6 | 69th | OF Carlos Lee ChA |
| 7 | 76th | 2B Luis Castillo Fla |
| 8 | 93rd | SP Jose Contreras ChA |
| 9 | 100th | 1B Mark Teixeira Tex |
| 10 | 117th | SP Esteban Loaiza NYA |
| 11 | 124th | SP Odalis Perez LA |
| 12 | 141st | OF J.D. Drew Atl |
| 13 | 148th | OF Jeromy Burnitz Col |
| 14 | 165th | SS Rich Aurilia SD |
| 15 | 172nd | OF Ryan Klesko SD |
| 16 | 189th | RP Trevor Hoffman SD |
| 17 | 196th | C Matthew LeCroy Min |
| 18 | 213th | OF Cliff Floyd NYN |
| 19 | 220th | SP Jeff Weaver LA |
| 20 | 237th | 2B Junior Spivey Mil |
| 21 | 244th | RP Joe Nathan Min |
| 22 | 261st | 2B Brian Roberts Bal |
| 23 | 268th | SP Kirk Rueter SF |
| 24 | 285th | 3B Joe Randa KC |
| 25 | 292nd | OF Moises Alou ChN |
| 26 | 309th | SP Jae Weong Seo NYN |
| 27 | 316th | OF Alex Sanchez Det |
| 28 | 333rd | SP Aquilino Lopez Tor |
| 29 | 340th | SP Oliver Perez Pit |