| Round | Overall | Player |
|---|---|---|
| 1 | 9th | OF Manny Ramirez Bos |
| 2 | 16th | OF Sammy Sosa ChN |
| 3 | 33rd | SS Edgar Renteria StL |
| 4 | 40th | RP Billy Wagner Phi |
| 5 | 57th | SP Derek Lowe Bos |
| 6 | 64th | SS Orlando Cabrera Bos |
| 7 | 81st | 3B Aramis Ramirez ChN |
| 8 | 88th | SS Mike Young Tex |
| 9 | 105th | SP Mark Buehrle ChA |
| 10 | 112th | RP Ugueth Urbina Det |
| 11 | 129th | 1B Nick Johnson Mon |
| 12 | 136th | SP Mike Hampton Atl |
| 13 | 153rd | 2B Orlando Hudson Tor |
| 14 | 160th | C Mike Lieberthal Phi |
| 15 | 177th | SP Gil Meche Sea |
| 16 | 184th | OF Raul Mondesi Ana |
| 17 | 201st | SP Tom Glavine NYN |
| 18 | 208th | 1B Jason Phillips NYN |
| 19 | 225th | 1B Shea Hillenbrand Ari |
| 20 | 232nd | SP Zach Day Mon |
| 21 | 249th | 1B Carlos Pena Det |
| 22 | 256th | OF Laynce Nix Tex |
| 23 | 273rd | SP Kurt Ainsworth Bal |
| 24 | 280th | C Ben Davis ChA |
| 25 | 297th | OF Kevin Mench Tex |
| 26 | 304th | RP LaTroy Hawkins ChN |
| 27 | 321st | SP Jason Marquis StL |
| 28 | 328th | SP Jeremy Bonderman Det |
| 29 | 345th | OF Larry Bigbie Bal |