| Round | Overall | Player |
|---|---|---|
| 1 | 1st | 3B Alex Rodriguez NYA |
| 2 | 24th | 1B Richie Sexson Sea |
| 3 | 25th | 2B Chase Utley Phi |
| 4 | 48th | 2B Felipe Lopez Was |
| 5 | 49th | C Joe Mauer Min |
| 6 | 72nd | OF Pat Burrell Phi |
| 7 | 73rd | OF Jim Edmonds StL |
| 8 | 96th | DH Jim Thome ChA |
| 9 | 97th | SP Ben Sheets Mil |
| 10 | 120th | SP Jeremy Bonderman Det |
| 11 | 121st | OF Magglio Ordonez Det |
| 12 | 144th | C Jorge Posada NYA |