| Round | Overall | Player |
|---|---|---|
| 1 | 10th | SS Miguel Tejada Bal |
| 2 | 15th | 2B Chase Utley Phi |
| 3 | 34th | OF Carlos Beltran NYN |
| 4 | 39th | 1B Carlos Delgado NYN |
| 5 | 58th | 1B Paul Konerko ChA |
| 6 | 63rd | OF Ichiro Suzuki Sea |
| 7 | 82nd | SP Josh Beckett Bos |
| 8 | 87th | 3B Adrian Beltre Sea |
| 9 | 106th | C Ivan Rodriguez Det |
| 10 | 111th | SP Zach Duke Pit |
| 11 | 130th | RP Armando Benitez SF |
| 12 | 135th | SP Matt Cain SF |
| 13 | 154th | SP Roger Clemens Hou |
| 14 | 159th | C Jorge Posada NYA |
| 15 | 178th | SP Oliver Perez Pit |
| 16 | 183rd | OF Jason Lane Hou |
| 17 | 202nd | OF Luis Gonzalez Ari |
| 18 | 207th | SP Jorge Sosa StL |
| 19 | 226th | SP Odalis Perez KC |
| 20 | 231st | SP Kenny Rogers Det |
| 21 | 250th | RP Joel Pineiro Bos |
| 22 | 255th | 2B Ray Durham SF |
| 23 | 274th | 3B Bill Mueller LAD |
| 24 | 279th | SS Jack Wilson Pit |
| 25 | 298th | C Johnny Estrada Mil |
| 26 | 303rd | OF Jacque Jones ChN |
| 27 | 322nd | 1B Lance Niekro SF |
| 28 | 327th | SS Stephen Drew Ari |
| 29 | 346th | OF Steve Finley SF |