| Round | Overall | Player |
|---|---|---|
| 1 | 1st |
3B
Alex Rodriguez
|
| 2 | 24th |
1B
Justin Morneau
|
| 3 | 25th |
2B
Brandon Phillips
|
| 4 | 48th |
C
Joe Mauer
|
| 5 | 49th |
OF
Alexis Rios
|
| 6 | 72nd |
RP
Francisco Rodriguez
|
| 7 | 73rd |
RP
J.J. Putz
|
| 8 | 96th |
RP
Jose Valverde
|
| 9 | 97th |
SP
Daisuke Matsuzaka
|
| 10 | 120th |
OF
Hideki Matsui
|
| 11 | 121st |
SP
Yovani Gallardo
|
| 12 | 144th |
OF
Pat Burrell
|
| 13 | 145th |
SS
Khalil Greene
|
| 14 | 168th |
1B
Joey Votto
|
| 15 | 169th |
SP
Joe Blanton
|
| 16 | 192nd |
OF
J.D. Drew
|
| 17 | 193rd |
SP
Ian Snell
|
| 18 | 216th |
3B
Eric Chavez
|
| 19 | 217th |
SP
Greg Maddux
|
| 20 | 240th |
SP
Homer Bailey
|
| 21 | 241st |
SS
Julio Lugo
|
| 22 | 264th |
C
Kurt Suzuki
|
| 23 | 265th |
RP
B.J. Ryan
|
| 24 | 288th |
OF
Travis Buck
|
| 25 | 289th |
SP
Kyle Kendrick
|
| 26 | 312th |
2B
Jose Lopez
|
| 27 | 313th |
1B
Lyle Overbay
|
| 28 | 336th |
OF
Carlos Gomez
|
| 29 | 337th |
SP
Shaun Marcum
|