| Round | Overall | Player |
|---|---|---|
| 1 | 6th | 1B Mark Teixeira NYA |
| 2 | 19th | 3B Pablo Sandoval SF |
| 3 | 30th | C Brian McCann Atl |
| 4 | 43rd | 2B Brian Roberts Bal |
| 5 | 54th | OF Nelson Cruz Tex |
| 6 | 67th | RP Jonathan Broxton LAD |
| 7 | 78th | SP Yovani Gallardo Mil |
| 8 | 91st | SP Matt Cain SF |
| 9 | 102nd | SP Max Scherzer Det |
| 10 | 115th | OF Raul Ibanez Phi |
| 11 | 126th | OF Torii Hunter LAA |
| 12 | 139th | SP David Price TB |
| 13 | 150th | RP Chad Qualls TB |
| 14 | 163rd | SP Edwin Jackson ChA |
| 15 | 174th | SP Ted Lilly LAD |
| 16 | 187th | OF Nyjer Morgan Was |
| 17 | 198th | SP Scott Feldman Tex |
| 18 | 211th | SS Alcides Escobar KC |
| 19 | 222nd | SP Joel Pineiro LAA |
| 20 | 235th | SP Barry Zito SF |
| 21 | 246th | SP Dallas Braden Oak |
| 22 | 259th | SP Aaron Cook Col |
| 23 | 270th | SP Gil Meche KC |
| 24 | 283rd | OF Mark DeRosa SF |
| 25 | 294th | SP Brandon McCarthy Oak |
| 26 | 307th | OF Marlon Byrd ChN |