| Round | Overall | Player |
|---|---|---|
| 1 | 7th | 1B Prince Fielder Mil |
| 2 | 18th | OF Justin Upton Ari |
| 3 | 31st | 1B Justin Morneau Min |
| 4 | 42nd | 3B Pablo Sandoval SF |
| 5 | 55th | SS Jose Reyes NYN |
| 6 | 66th | OF Manny Ramirez ChA |
| 7 | 79th | SP Yovani Gallardo Mil |
| 8 | 90th | SP Jered Weaver LAA |
| 9 | 103rd | SP Brett Anderson Oak |
| 10 | 114th | OF Alfonso Soriano ChN |
| 11 | 127th | SP Roy Oswalt Phi |
| 12 | 138th | SP Brandon Webb Tex |
| 13 | 151st | C Geovany Soto ChN |
| 14 | 162nd | RP David Aardsma Sea |
| 15 | 175th | RP Brian Fuentes Min |
| 16 | 186th | OF Garrett Jones Pit |
| 17 | 199th | C Kurt Suzuki Oak |
| 18 | 210th | SP Homer Bailey Cin |
| 19 | 223rd | OF Julio Borbon Tex |
| 20 | 234th | 3B Martin Prado Atl |
| 21 | 247th | SP Joba Chamberlain NYA |
| 22 | 258th | SP Ricky Romero Tor |
| 23 | 271st | SP Ross Ohlendorf Pit |
| 24 | 282nd | SS Everth Cabrera SD |
| 25 | 295th | 2B Scott Sizemore Det |
| 26 | 306th | 1B Russ Branyan Sea |
| 27 | 319th | 3B Casey Mcgehee Mil |
| 28 | 330th | RP Joe Nathan Min |
| 29 | 343rd | OF Nyjer Morgan Was |