| Round | Overall | Player |
|---|---|---|
| 1 | 3rd |
3B
Alex Rodriguez
|
| 2 | 22nd |
OF
Justin Upton
|
| 3 | 27th |
OF
Grady Sizemore
|
| 4 | 46th |
SP
Dan Haren
|
| 5 | 51st |
SP
Justin Verlander
|
| 6 | 70th |
1B
Billy Butler
|
| 7 | 75th |
2B
Brian Roberts
|
| 8 | 94th |
3B
Aramis Ramirez
|
| 9 | 99th |
RP
Francisco Rodriguez
|
| 10 | 118th |
RP
Carlos Marmol
|
| 11 | 123rd |
SP
Brett Anderson
|
| 12 | 142nd |
SP
Carlos Zambrano
|
| 13 | 147th |
OF
Nate McLouth
|
| 14 | 166th |
OF
Carlos Beltran
|
| 15 | 171st |
1B
Adam LaRoche
|
| 16 | 190th |
SS
Rafael Furcal
|
| 17 | 195th |
SP
Wade Davis
|
| 18 | 214th |
C
Yadier Molina
|
| 19 | 219th |
SP
Joe Saunders
|
| 20 | 238th |
OF
Colby Rasmus
|
| 21 | 243rd |
SP
Mat Latos
|
| 22 | 262nd |
SS
Ryan Theriot
|
| 23 | 267th |
SP
Ryan Madson
|
| 24 | 286th |
C
Ramon Hernandez
|
| 25 | 291st |
SP
C.J. Wilson
|
| 26 | 310th |
3B
Albert Callaspo
|
| 27 | 315th |
SP
Nick Blackburn
|
| 28 | 334th |
OF
Milton Bradley
|
| 29 | 339th |
3B
Edwin Encarnacion
|