| Round | Overall | Player |
|---|---|---|
| 1 | 1st | SS Hanley Ramirez Fla |
| 2 | 24th | C Buster Posey SF |
| 3 | 25th | 2B Ian Kinsler Tex |
| 4 | 48th | 2B Chase Utley Phi |
| 5 | 49th | OF Giancarlo Stanton Fla |
| 6 | 72nd | SP Dan Haren LAA |
| 7 | 73rd | SP Mat Latos Cin |
| 8 | 96th | OF Jason Bay NYN |
| 9 | 97th | 3B Mark Reynolds Bal |
| 10 | 120th | OF Carlos Quentin SD |
| 11 | 121st | 1B Lance Berkman STL |
| 12 | 144th | SP Jeremy Hellickson TB |
| 13 | 145th | SP Brian Matusz Bal |
| 14 | 168th | 1B Todd Helton Col |
| 15 | 169th | OF Manny Ramirez TB |
| 16 | 192nd | 3B Ian Stewart ChN |
| 17 | 193rd | C Chris Iannetta LAA |
| 18 | 216th | SS Erick Aybar LAA |
| 19 | 217th | 1B Brandon Belt SF |
| 20 | 240th | 2B Eric Young Col |
| 21 | 241st | 3B David Freese StL |
| 22 | 264th | SP Travis Wood ChN |
| 23 | 265th | SP Kevin Slowey Col |
| 24 | 288th | SP Michael Pineda NYA |
| 25 | 289th | SP Josh Tomlin Cle |
| 26 | 312th | SP Justin Duchscherer Bal |
| 27 | 313th | SP Scott Baker Min |
| 28 | 336th | RP Chris Sale ChA |
| 29 | 337th | RP Jacob McGee TB |