| Round | Overall | Player |
|---|---|---|
| 1 | 5th | OF Carlos Gonzalez Col |
| 2 | 20th | 1B Mark Teixeira NYA |
| 3 | 29th | SP C.C. Sabathia NYA |
| 4 | 44th | SS Jimmy Rollins Phi |
| 5 | 53rd | C Brian McCann Atl |
| 6 | 68th | SP Jered Weaver LAA |
| 7 | 77th | 3B Adrian Beltre Tex |
| 8 | 92nd | OF Corey Hart Mil |
| 9 | 101st | RP Mariano Rivera NYA |
| 10 | 116th | OF Melvin Upton TB |
| 11 | 125th | SP Brett Anderson Oak |
| 12 | 140th | SP Madison Bumgarner SF |
| 13 | 149th | OF Carlos Beltran STL |
| 14 | 164th | 2B Howie Kendrick LAA |
| 15 | 173rd | OF Logan Morrison Fla |
| 16 | 188th | RP Jose Valverde Det |
| 17 | 197th | 1B Ike Davis NYN |
| 18 | 212th | SS Alex Gonzalez Mil |
| 19 | 221st | SP Ricky Nolasco Fla |
| 20 | 236th | SP Jorge de la Rosa Col |
| 21 | 245th | C John Buck Fla |
| 22 | 260th | 1B Mitch Moreland Tex |
| 23 | 269th | 2B Orlando Hudson SD |
| 24 | 284th | 2B Ryan Raburn Det |
| 25 | 293rd | SP Brian Duensing Min |
| 26 | 308th | SP Chris Young NYN |
| 27 | 317th | SP Brett Cecil Tor |
| 28 | 332nd | OF Mike Morse Was |
| 29 | 341st | 3B Brandon Inge Det |