| Round | Overall | Player |
|---|---|---|
| 1 | 1st | OF Matt Kemp LAD |
| 2 | 24th | SP Clayton Kershaw LAD |
| 3 | 25th | C Mike Napoli Bos |
| 4 | 48th | SS Asdrubal Cabrera Cle |
| 5 | 49th | OF Alex Gordon KC |
| 6 | 72nd | 3B Aramis Ramirez Mil |
| 7 | 73rd | SP Yu Darvish Tex |
| 8 | 96th | SP Johan Santana NYN |
| 9 | 97th | RP John Axford Mil |
| 10 | 120th | 3B Mike Young Phi |
| 11 | 121st | 2B Danny Espinosa Was |
| 12 | 144th | 1B Adam Lind Tor |
| 13 | 145th | 1B Ryan Howard Phi |
| 14 | 168th | SP Derek Holland Tex |
| 15 | 169th | OF Michael Bourn Atl |
| 16 | 192nd | SP Tim Hudson Atl |
| 17 | 193rd | SP Chad Billingsley LAD |
| 18 | 216th | OF Josh Willingham Min |
| 19 | 217th | 3B Scott Rolen Cin |
| 20 | 240th | RP Aroldis Chapman Cin |
| 21 | 241st | SP Andy Pettitte NYA |
| 22 | 264th | 1B Todd Helton Col |
| 23 | 265th | RP Kenley Jansen LAD |
| 24 | 288th | 1B James Loney TB |
| 25 | 289th | SS Alex Gonzalez Mil |
| 26 | 312th | 2B Mark Ellis LAD |
| 27 | 313th | C A.J. Elllis LAD |
| 28 | 336th | SP Julio Teheran Atl |
| 29 | 337th | SS Ryan Theriot SF |