| Round | Overall | Player |
|---|---|---|
| 1 | 8th | OF Giancarlo Stanton Mia |
| 2 | 17th | OF Josh Hamilton LAA |
| 3 | 32nd | 3B Ryan Zimmerman Was |
| 4 | 41st | SP Cole Hamels Phi |
| 5 | 56th | 1B Joe Mauer Min |
| 6 | 65th | OF Melky Cabrera Tor |
| 7 | 80th | 1B Chris Davis Bal |
| 8 | 89th | SP James Shields KC |
| 9 | 104th | 2B Dan Uggla Atl |
| 10 | 113th | 3B Will Middlebrooks Bos |
| 11 | 128th | SP Hiroki Kuroda NYA |
| 12 | 137th | RP Sergio Romo SF |
| 13 | 152nd | SP Dan Haren LAD |
| 14 | 161st | SS Jed Lowrie Oak |
| 15 | 176th | SP Alexi Ogando Tex |
| 16 | 185th | C Jonathan Lucroy Mil |
| 17 | 200th | RP Huston Street SD |
| 18 | 209th | 1B Mark Reynolds NYA |
| 19 | 224th | SP Tommy Hanson LAA |
| 20 | 233rd | OF Carlos Quentin SD |
| 21 | 248th | RP Jason Motte StL |
| 22 | 257th | SP A.J. Griffin Oak |
| 23 | 272nd | 2B Kelly Johnson TB |
| 24 | 281st | SP Mitchell Boggs StL |
| 25 | 296th | 3B Jordan Pacheco Col |
| 26 | 305th | SP Bronson Arroyo Cin |
| 27 | 320th | SS Stephen Drew Bos |
| 28 | 329th | OF Yasiel Puig LAD |
| 29 | 344th | OF David Murphy Tex |