| Round | Overall | Player |
|---|---|---|
| 1 | 3rd | 1B Paul Goldschmidt Ari |
| 2 | 22nd | OF Jose Bautista Tor |
| 3 | 27th | 2B Jason Kipnis Cle |
| 4 | 46th | 3B Ryan Zimmerman Was |
| 5 | 51st | OF Mark Trumbo Ari |
| 6 | 70th | OF Wil Myers TB |
| 7 | 75th | DH David Ortiz Bos |
| 8 | 94th | SP Jered Weaver LAA |
| 9 | 99th | OF Curtis Granderson NYN |
| 10 | 118th | SP C.J. Wilson LAA |
| 11 | 123rd | SS Asdrubal Cabrera Was |
| 12 | 142nd | SP Lance Lynn StL |
| 13 | 147th | SP Chris Archer TB |
| 14 | 166th | SP Zack Wheeler NYN |
| 15 | 171st | RP Sergio Romo SF |
| 16 | 190th | RP Ernesto Frieri Pit |
| 17 | 195th | 3B Will Middlebrooks Bos |
| 18 | 214th | SS Brad Miller Sea |
| 19 | 219th | SP Jeff Samardzija Oak |
| 20 | 238th | SP Tyson Ross SD |
| 21 | 243rd | 1B Adam LaRoche Was |
| 22 | 262nd | 2B Rickie Weeks Mil |
| 23 | 267th | C Jarrod Saltalamacchia Mia |
| 24 | 286th | SP Josh Johnson SD |
| 25 | 291st | C J.P. Arencibia Tex |
| 26 | 310th | SP Dillon Gee NYN |
| 27 | 315th | OF Melky Cabrera Tor |
| 28 | 334th | OF Carlos Quentin SD |
| 29 | 339th | SP Kevin Gausman Bal |