| Round | Overall | Player |
|---|---|---|
| 1 | 1st | SS Alex Rodriguez Sea |
| 2 | 24th | P Randy Johnson Ari |
| 3 | 25th | P Trevor Hoffman SD |
| 4 | 48th | OF Kenny Lofton Cle |
| 5 | 49th | P Curt Schilling Phi |
| 6 | 72nd | OF Raul Mondesi LA |
| 7 | 73rd | 2B Roberto Alomar Cle |
| 8 | 96th | 3B Ken Caminiti Hou |
| 9 | 97th | P Kevin Appier KC |
| 10 | 120th | 1B Ryan Klesko Atl |
| 11 | 121st | P Pat Hentgen Tor |
| 12 | 144th | P Livan Hernandez Fla |
| 13 | 145th | OF Brady Anderson Bal |
| 14 | 168th | P Alex Fernandez Fla |
| 15 | 169th | P Joey Hamilton Tor |
| 16 | 192nd | OF David Segui Sea |
| 17 | 193rd | P Wilson Alvarez TB |
| 18 | 216th | P Darryl Kile Col |
| 19 | 217th | C Charles Johnson Bal |
| 20 | 240th | OF Henry Rodriguez ChN |
| 21 | 241st | P Jaime Navarro ChA |
| 22 | 264th | 3B Russ Davis Sea |
| 23 | 265th | 1B Rico Brogna Phi |
| 24 | 288th | OF Ruben Rivera SD |
| 25 | 289th | 2B Quilvio Veras SD |
| 26 | 312th | P Chad Ogea Phi |