| Round | Overall | Player |
|---|---|---|
| 1 | 6th | 2B Craig Biggio Hou |
| 2 | 19th | C Ivan Rodriguez Tex |
| 3 | 30th | P Trevor Hoffman SD |
| 4 | 43rd | OF Shawn Green Tor |
| 5 | 54th | 3B Jeff Cirillo Mil |
| 6 | 67th | P Matt Morris StL |
| 7 | 78th | OF Gary Sheffield LA |
| 8 | 91st | 1B Jason Giambi Oak |
| 9 | 102nd | P Andy Ashby SD |
| 10 | 115th | SS Mike Caruso ChA |
| 11 | 126th | P Justin Thompson Det |
| 12 | 139th | OF Matt Lawton Min |
| 13 | 150th | P Todd Stottlemyre Ari |
| 14 | 163rd | P Rolando Arrojo TB |
| 15 | 174th | OF Magglio Ordonez ChA |
| 16 | 187th | 1B Jeff King KC |
| 17 | 198th | P Donovan Osborne StL |
| 18 | 211th | OF Tony Womack Ari |
| 19 | 222nd | 3B Todd Zeile Tex |
| 20 | 235th | P Matt Anderson Det |
| 21 | 246th | P Matt Mantei Fla |
| 22 | 259th | 2B Carlos Febles KC |
| 23 | 270th | P Hideki Irabu NYA |
| 24 | 283rd | C Chris Widger Mon |
| 25 | 294th | SS Aaron Ledesma TB |
| 26 | 307th | OF Carl Everett Hou |