| Round | Overall | Player |
|---|---|---|
| 1 | 1st | SS Alex Rodriguez Sea |
| 2 | 24th | P Troy Percival Ana |
| 3 | 25th | 1B Carlos Delgado Tor |
| 4 | 48th | P Mariano Rivera NYA |
| 5 | 49th | P Jeff Shaw LA |
| 6 | 72nd | 3B Eric Chavez Oak |
| 7 | 73rd | 2B Todd Walker Min |
| 8 | 96th | OF Bob Higginson Det |
| 9 | 97th | OF Juan Encarnacion Det |
| 10 | 120th | P Ismael Valdez LA |
| 11 | 121st | 1B Kevin Young Pit |
| 12 | 144th | P Darren Dreifort LA |
| 13 | 145th | 3B Adrian Beltre LA |
| 14 | 168th | OF Carlos Beltran KC |
| 15 | 169th | C A.J. Hinch Oak |
| 16 | 192nd | P Roy Halladay Tor |
| 17 | 193rd | OF Fernando Seguignol Mon |
| 18 | 216th | OF Richard Hidalgo Hou |
| 19 | 217th | C Mitch Meluskey Hou |
| 20 | 240th | 1B Paul Konerko ChA |
| 21 | 241st | P Steve Woodard Mil |
| 22 | 264th | OF Gabe Kapler Det |
| 23 | 265th | 2B Marlon Anderson Phi |
| 24 | 288th | P Gabe White Cin |
| 25 | 289th | P John Rocker Atl |
| 26 | 312th | P Mark Clark Tex |