| Round | Overall | Player |
|---|---|---|
| 1 | 4th | 1B Mo Vaughn Ana |
| 2 | 21st | C Jason Kendall Pit |
| 3 | 28th | P Pedro Martinez Bos |
| 4 | 45th | SS Edgar Renteria StL |
| 5 | 52nd | P Mike Jackson Cle |
| 6 | 69th | OF Cliff Floyd Fla |
| 7 | 76th | P Al Leiter NYN |
| 8 | 93rd | OF Jeromy Burnitz Mil |
| 9 | 100th | OF Paul O'Neill NYA |
| 10 | 117th | OF Rondell White Mon |
| 11 | 124th | 3B Fernando Tatis StL |
| 12 | 141st | 1B Travis Lee Ari |
| 13 | 148th | 2B Fernando Vina Mil |
| 14 | 165th | OF Bobby Abreu Phi |
| 15 | 172nd | P Kelvim Escobar Tor |
| 16 | 189th | OF Dmitri Young Cin |
| 17 | 196th | OF Quinton McCracken TB |
| 18 | 213th | P Carl Pavano Mon |
| 19 | 220th | P Jason Schmidt Pit |
| 20 | 237th | P Rich Loiselle Pit |
| 21 | 244th | SS Tony Batista Ari |
| 22 | 261st | P Jon Lieber ChN |
| 23 | 268th | C Bobby Hughes Mil |
| 24 | 285th | C Darrin Fletcher Tor |
| 25 | 292nd | P Braden Looper Fla |
| 26 | 309th | 2B Miguel Cairo TB |