| Round | Overall | Player |
|---|---|---|
| 1 | 5th | C Mike Piazza NYN |
| 2 | 20th | OF Manny Ramirez Cle |
| 3 | 29th | 1B Jim Thome Cle |
| 4 | 44th | P Mike Mussina Bal |
| 5 | 53rd | 2B Roberto Alomar Cle |
| 6 | 68th | 3B Matt Williams Ari |
| 7 | 77th | OF Jim Edmonds Ana |
| 8 | 92nd | OF Raul Mondesi LA |
| 9 | 101st | OF Rondell White Mon |
| 10 | 116th | P Todd Stottlemyre Ari |
| 11 | 125th | P Scott Erickson Bal |
| 12 | 140th | SS Edgar Renteria StL |
| 13 | 149th | P John Rocker Atl |
| 14 | 164th | P Kerry Wood ChN |
| 15 | 173rd | OF Moises Alou Hou |
| 16 | 188th | P Joey Hamilton Tor |
| 17 | 197th | 1B Jeff King KC |
| 18 | 212th | 2B Mickey Morandini ChN |
| 19 | 221st | P Ricky Bottalico StL |
| 20 | 236th | OF Reggie Sanders SD |
| 21 | 245th | P Robert Person Tor |
| 22 | 260th | C Darrin Fletcher Tor |
| 23 | 269th | OF Mike Cameron Cin |
| 24 | 284th | P Brian Anderson Ari |
| 25 | 293rd | OF Jose Guillen Pit |
| 26 | 308th | 1B Brad Fullmer Mon |
| 27 | 317th | P Danny Graves Cin |