| Round | Overall | Player |
|---|---|---|
| 1 | 3rd | 1B Mark McGwire StL |
| 2 | 22nd | P Pedro Martinez Bos |
| 3 | 27th | OF Vladimir Guerrero Mon |
| 4 | 46th | OF J.D. Drew StL |
| 5 | 51st | P Dustin Hermanson Mon |
| 6 | 70th | 3B Robin Ventura NYN |
| 7 | 75th | 2B Todd Walker Min |
| 8 | 94th | 3B Eric Chavez Oak |
| 9 | 99th | P Billy Taylor Oak |
| 10 | 118th | P Kenny Rogers Oak |
| 11 | 123rd | P Jeff Fassero Sea |
| 12 | 142nd | OF Ellis Burks SF |
| 13 | 147th | P Rolando Arrojo TB |
| 14 | 166th | OF Matt Lawton Min |
| 15 | 171st | C Charles Johnson Bal |
| 16 | 190th | SS Alex Gonzalez Tor |
| 17 | 195th | 1B Mark Grace ChN |
| 18 | 214th | P Darryl Kile Col |
| 19 | 219th | P Bob Wickman Mil |
| 20 | 238th | C Mike Lieberthal Phi |
| 21 | 243rd | P Omar Daal Ari |
| 22 | 262nd | OF Jeremy Giambi KC |
| 23 | 267th | P Armando Benitez NYN |
| 24 | 286th | OF Brian McRae NYN |
| 25 | 291st | C Jason Varitek Bos |
| 26 | 310th | P Hideki Irabu NYA |
| 27 | 315th | 2B Carlos Febles KC |