| Round | Overall | Player |
|---|---|---|
| 1 | 7th | SS Derek Jeter NYA |
| 2 | 18th | C Jason Kendall Pit |
| 3 | 31st | 1B Carlos Delgado Tor |
| 4 | 42nd | 1B Rafael Palmeiro Tex |
| 5 | 55th | OF Tim Salmon Ana |
| 6 | 66th | OF Darin Erstad Ana |
| 7 | 79th | OF Rusty Greer Tex |
| 8 | 90th | OF Jim Edmonds Ana |
| 9 | 103rd | DH Jose Canseco TB |
| 10 | 114th | OF David Justice Cle |
| 11 | 127th | 3B Jeff Cirillo Mil |
| 12 | 138th | 2B Delino DeShields Bal |
| 13 | 151st | 1B Kevin Young Pit |
| 14 | 162nd | 2B Mike Lansing Col |
| 15 | 175th | C Todd Greene Ana |
| 16 | 186th | C Charles Johnson Bal |
| 17 | 199th | P Darryl Kile Col |
| 18 | 210th | P Aaron Sele Tex |
| 19 | 223rd | P Kirk Rueter SF |
| 20 | 234th | P Jaret Wright Cle |
| 21 | 247th | P Ken Hill Ana |
| 22 | 258th | OF Moises Alou Hou |
| 23 | 271st | 3B Michael Barrett Mon |
| 24 | 282nd | P Dave Burba Cle |
| 26 | 306th | OF Carlos Beltran KC |
| 27 | 319th | P Steve Trachsel ChN |