| Round | Overall | Player |
|---|---|---|
| 1 | 4th | 1B Mark McGwire StL |
| 2 | 21st | P Kevin Brown LA |
| 3 | 28th | 2B Damion Easley Det |
| 4 | 45th | P Curt Schilling Phi |
| 5 | 52nd | OF J.D. Drew StL |
| 6 | 69th | P Orlando Hernandez NYA |
| 7 | 76th | OF Bob Higginson Det |
| 8 | 93rd | OF Jose Cruz Jr Tor |
| 9 | 100th | 3B Troy Glaus Ana |
| 10 | 117th | P Ismael Valdez LA |
| 11 | 124th | OF Juan Encarnacion Det |
| 12 | 141st | C A.J. Hinch Oak |
| 13 | 148th | P Mike Timlin Bal |
| 14 | 165th | P Joey Hamilton Tor |
| 15 | 172nd | P Kevin Millwood Atl |
| 16 | 189th | 1B Paul Konerko ChA |
| 17 | 196th | OF Eric Davis StL |
| 18 | 213th | P Carl Pavano Mon |
| 19 | 220th | SS Alex Gonzalez Tor |
| 20 | 237th | C Eli Marrero StL |
| 21 | 244th | 3B Cal Ripken Bal |
| 22 | 261st | P Hideki Irabu NYA |
| 23 | 268th | 1B Jeff King KC |
| 24 | 285th | P Alex Fernandez Fla |
| 25 | 292nd | 2B Homer Bush Tor |
| 26 | 309th | P Wilson Alvarez TB |
| 27 | 316th | 3B Aaron Boone Cin |