| Round | Overall | Player |
|---|---|---|
| 1 | 11th | OF Sammy Sosa ChN |
| 2 | 14th | 3B Vinny Castilla Col |
| 3 | 35th | 1B Jim Thome Cle |
| 4 | 38th | 2B Roberto Alomar Cle |
| 5 | 59th | C Jorge Posada NYA |
| 6 | 62nd | P Tom Gordon Bos |
| 7 | 83rd | 1B Jay Buhner Sea |
| 8 | 86th | P David Wells Tor |
| 9 | 107th | P Francisco Cordova Pit |
| 10 | 110th | OF Jeromy Burnitz Mil |
| 11 | 131st | P Jeff Fassero Sea |
| 12 | 134th | SS Neifi Perez Col |
| 13 | 155th | P Kevin Tapani ChN |
| 14 | 158th | OF Tony Gwynn SD |
| 15 | 179th | P Kevin Appier KC |
| 16 | 182nd | OF Reggie Sanders SD |
| 17 | 203rd | OF Brian S. Giles Pit |
| 18 | 206th | 1B Jose Offerman Bos |
| 19 | 227th | C Benito Santiago ChN |
| 20 | 230th | P Livan Hernandez Fla |
| 21 | 251st | P Gregg Olson Ari |
| 22 | 254th | P Mike Sirotka ChA |
| 23 | 275th | 3B Bobby Smith TB |
| 24 | 278th | 1B Andres Galarraga Atl |
| 25 | 299th | 1B Richie Sexson Cle |
| 26 | 302nd | P Eric Milton Min |
| 27 | 323rd | P Ramon Martinez Bos |