| Round | Overall | Player |
|---|---|---|
| 1 | 1st | SS Alex Rodriguez Tex |
| 2 | 24th | OF Ken Griffey Jr Cin |
| 3 | 25th | SP Kevin Brown LA |
| 4 | 48th | 1B Frank Thomas ChA |
| 5 | 49th | SP Ryan Dempster Fla |
| 6 | 72nd | OF Darin Erstad Ana |
| 7 | 73rd | SP Kris Benson Pit |
| 8 | 96th | OF Preston Wilson Fla |
| 9 | 97th | RP Kazuhiro Sasaki Sea |
| 10 | 120th | RP Anthony Alford Fla |
| 11 | 121st | OF Tim Salmon Ana |
| 12 | 144th | 3B Joe Randa KC |
| 13 | 145th | 2B Jose Ortiz Oak |
| 14 | 168th | C Ramon Hernandez Oak |
| 15 | 169th | 1B Eric Karros LA |
| 16 | 192nd | SP Ryan Anderson Sea |
| 17 | 193rd | C Mitch Meluskey Det |
| 18 | 216th | SP Adam Eaton SD |
| 19 | 217th | 3B Matt Williams Ari |
| 20 | 240th | OF Josh Hamilton TB |
| 21 | 241st | SS Julio Lugo Hou |
| 22 | 264th | SP Mark Mulder Oak |
| 23 | 265th | 3B Aaron Boone Cin |
| 24 | 288th | 2B Brent Abernathy TB |
| 25 | 289th | OF Delino DeShields Bal |
| 26 | 312th | SS Adam Everett Hou |
| 27 | 313th | RP Wade Miller Hou |
| 28 | 336th | 2B Luis Rivas Min |
| 29 | 337th | 3B Xavier Nady SD |