| Round | Overall | Player |
|---|---|---|
| 1 | 6th | 3B Troy Glaus Ana |
| 2 | 19th | SP Randy Johnson Ari |
| 3 | 30th | OF Brian S. Giles Pit |
| 4 | 43rd | C Jorge Posada NYA |
| 5 | 54th | SP Al Leiter NYN |
| 6 | 67th | RP Kazuhiro Sasaki Sea |
| 7 | 78th | SP Livan Hernandez SF |
| 8 | 91st | RP Keith Foulke ChA |
| 9 | 102nd | SS Barry Larkin Cin |
| 10 | 115th | OF Luis Gonzalez Ari |
| 11 | 126th | OF Lance Berkman Hou |
| 12 | 139th | OF Ben Grieve TB |
| 13 | 150th | SP Rick Ankiel StL |
| 14 | 163rd | SP Matt Morris StL |
| 15 | 174th | SP Woody Williams SD |
| 16 | 187th | DH Brad Fullmer Tor |
| 17 | 198th | 2B Luis Castillo Fla |
| 18 | 211th | SP Shane Reynolds Hou |
| 19 | 222nd | SS Rich Aurilia SF |
| 20 | 235th | 2B Jose Offerman Bos |
| 21 | 246th | SP Chuck Smith Fla |
| 22 | 259th | 1B Lee Stevens Mon |
| 23 | 270th | DH Jose Canseco Ana |
| 24 | 283rd | OF Roger Cedeno Det |
| 25 | 294th | SP Ryan Kohlmeier Bal |
| 26 | 307th | OF Alex Ochoa Cin |
| 27 | 318th | OF Ron Gant Col |
| 28 | 331st | 3B Chris Stynes Bos |
| 29 | 342nd | C Tyler Houston Mil |