| Week | Add | Drop |
| Pre-Season |
Round 1: OF Mark Kotsay - Oak | |
| Week 1 |
Round 1: SP Brett Tomko - SF Round 2: 2B Neifi Perez - SF |
Round 2: 2B Mark Ellis - Oak |
| Week 5 |
Round 2: 2B Rickie Weeks - Mil | |
| Week 9 |
Round 1: SP Shawn Estes - Col Round 2: RP Tim Worrell - Phi |
Round 1: SP Byung-Hyun Kim - Bos |
| Week 10 |
Round 2: SP Darrell May - KC | |
| Week 12 |
Round 1: SP Shawn Chacon - Col | |
| Week 18 |
Round 2: SP Brian Anderson - KC Round 2: SS Ramon Vazquez - SD | |
| Week 19 |
Round 1: SP Noah Lowry - SF |
| 1st Team | 2nd Team | Votes |